Peer-reviewed journal publications
Johannes Bill & Robert Legenstein (TUGRAZ)
Published in Frontiers in Neuroscience, 2014 December 16
G. Deco (UPF) and M.L. Kringelbach
Published in Neuron, 2014 December 3
Claude Bedard & Alain Destexhe (CNRS)
Published in Physical Review E, 2014 October 28
Robert Legenstein (TUGRAZ) & Wolfgang Maass (TUGRAZ)
Published in PLoS Computational Biology, 2014 October 23
NEVESIM: Event-Driven Neural Simulation Framework with a Python Interface.
D. Pecevski, D. Kappel and Z. Jonke (TUGRAZ).
Published in Frontiers in Neuroinformatics, 2014 August 14
Spike-timing prediction in cortical neurons with active dendrites.
Richard Naud, Brice Bathellier & Wulfram Gerstner (EPFL)
Published in Frontiers in Computational Neuroscience, 2014 August 13
Mean-field formulation of Maxwell equations to model electrically inhomogeneous and isotropic media.
Claude Bedard & Alain Destexhe (CNRS)
Published in Journal of Electromagnetic Analysis and Applications, 2014 July 15
How Local Excitation–Inhibition Ratio Impacts the Whole Brain Dynamics.
Gustavo Deco (UPF), Adrian Ponce-Alvarez, Patric Hagmann, Gian Luca Romani, Dante Mantini & Maurizio Corbetta
Published in The Journal of Neuroscience, 2014 June 4
Noise as a resource for computation and learning in networks of spiking neurons.
Wolfgang Maass (TUGRAZ)
Published in Special Issue of the Proceedings of the IEEE on "Engineering Intelligent Electronic Systems based on Computational Neuroscience", 2014 April 14
Neural mechanisms of self-location.
Caswell Barry & Neil Burgess (UCL)
Published in Current Biology, 2014 April 14
A hybrid oscillatory interference / continuous attractor network model of grid cell firing.
Daniel Bush & Neil Burgess (UCL)
Published in The Journal of Neuroscience, 2014 April 2
What do grid Cells Contribute to Place Cell Firing?
Daniel Bush, Caswell Barry & Neil Burgess (UCL)
Published in Trends in Neurosciences, 2014 March
Peer-reviewed journal publications
Neural Network Model of Memory Retrieval
Stefano Recanatesi , Mikhail Katkov (WIS), Sandro Romani & Misha Tsodyks (WIS)
Published in Frontiers in Computational Neuroscience, 2015 December 17
Hemanth Mohan, Matthijs B. Verhoog, Keerthi K. Doreswamy, Guy Eyal (HUJI), Romy Aardse, Brendan N. Lodder, Natalia A. Goriounova, Boateng Asamoah, A.B. Clementine B. Brakspear, Colin Groot, Sophie van der Sluis, Guilherme Testa-Silva, Joshua Obermayer, Zimbo S.R.M. Boudewijns, Rajeevan T. Narayanan, Johannes C. Baayen, Idan Segev (HUJI), Huibert D. Mansvelder & Christiaan P.J. de Kock
Published in Cerebral CORTEX, 2015 August 28
Learning Spatiotemporally Encoded Pattern Transformations in Structured Spiking Neural Networks
Brian gardner (SURREY), Ioana Sporea & André Grüning (SURREY)
Published in Neural Computation, 2015 November 24
The Encoding of Decision Difficulty and Movement Time in the Primate Premotor Cortex
Marina Martinez-Garcia, Andrea Insabato, Mario Pannunzi, Jose L. Pardo-Vazquez, Carlos Acuña & Gustavo Deco (UPF)
Published in PLoS Computational Biology, 2015 November 10
The Cognitive Architecture of Spatial Navigation: Hippocampal and Striatal Contributions
Fabian Chersi (UCL) & Neil Burgess (UCL)
Published in Neuron, 2015 October 7
The Rediscovery of Slowness: Exploring the Timing of Cognition
Morten L. Kringelbach, Anthony R. McIntosh, Petra Ritter, Viktor K. Jirsa (AMU), and Gustavo Deco (UPF)
Published in Trends in Cognitive Sciences, 2015 October
Non-stationary filtered shot noise processes and applications to neuronal membranes.
Marco Brigham & Alain Destexhe (CNRS)
Published in Physical Review E, 2015 June 3
Efficient simulation of optical nonlinear cavity circuits.
Thomas Van Vaerenbergh, Martin Fiers, Joni Dambre (UGENT) & Peter Bienstman
Published in Optical and Quantum Electronics, 2015 June
Romain Veltz (INRIA), Pascal Chossat & Olivier Faugeras (INRIA)
Published in Journal of Mathematical Neuroscience, 2015 May 30
Espen Hagen, Torbjørn V. Ness (NMBU), Amir Khosrowshahi, Christina Sørensen, Marianne Fyhn, Torkel Hafting, Felix Franke & Gaute T. Einevoll (NMBU)
Published in Journal of Neuroscience Methods, 2015 April 30
Friedemann Zenke, Everton J. Agnes, & Wulfram Gerstner (EPFL)
Published in Nature Communications, 2015 April 21
Modelling and analysis of electrical potentials recorded in microelectrode arrays (MEAs).
Torbjørn V. Ness (NMBU), H. Chaitanya Chintaluri, Jan Potworowski, Szymon Łęski, Helena Głąbska, Daniel K. Wójcik, & Gaute T. Einevoll (NMBU)
Published in Neuroinformatics, 2015 March 31
Trainable hardware for dynamical computing using error backpropagation through physical media.
Michiel Hermans, Michaël Burm, Thomas Van Vaerenbergh, Joni Dambre (UGENT) & Peter Bienstman.
Published in Nature Communications, 2015 March 24
Memristor models for machine learning.
Juan Pablo Carbajal, Joni Dambre (UGENT), Michiel Hermans, & Benjamin Schrauwen (UGENT)
Published in Neural Computation, 2015 March
What Can Neuromorphic Event-Driven Precise Timing Add to Spike-Based Pattern Recognition?
Himanshu Akolkar, Cedric Meyer, Xavier Clady, Olivier Marre (UPMC), Chiara Bartolozzi, Stefano Panzeri & Ryad Benosman
Published in Neural Computation, 2015 March
Probabilistic inference in discrete spaces can be implemented into networks of LIF neurons.
D. Probst, M. A. Petrovici, I. Bytschok, J. Bill, D. Pecevski (TUGRAZ) J. Schemmel & KH Meier (UHEI)
Published in Frontiers in Computational Neuroscience, 2015 February 12
Gain modulation of synaptic inputs by network state in auditory cortex in vivo.
Ramon Reig, Yann Zerlaut, Ramiro Vergara, Alain Destexhe (CNRS UNIC) & M. Sanchez-Vives
Published in The Journal of Neuroscience, 2015 February 11
Peer-reviewed conference proceedings
Population Density Techniques for Modeling Neural Populations.
Marc de Kamps, Y. M. Lai and E. Duffin (LEEDS)
ICMNS 2015 (accepted abstract), June
Joni Dambre, Jeroen Burms and Ken Caluwaerts (UGENT)
Accepted for publication in the proceedings of ICRA, May 26-27
Peer-reviewed journal publications
Lindahl M and Hellgren Kotaleski J (KTH)
Published in eNeuro, 22 December 2016
Local recording of biological magnetic fields using Giant Magneto Resistance-based microprobes
Francesca Barbieri, Vincent Trauchessec, Laure Caruso, Josué Trejo-Rosillo, Bartosz Telenczuk (CNRS), Elodie Paul, Thierry Bal, Alain Destexhe (CNRS), Claude Fermon, Myriam Pannetier-Lecoeur & Gilles Ouanounou
Published in Scientific Reports, 2016 December 19
Gorka Zamora-López (UPF), Yuhan Chen, Gustavo Deco (UPF), Morten L. Kringelbach & Changsong Zhou
Published in Scientific Reports, 2016 December 5
Córdova-Palomera A., Tornador C., Falcón C., Bargalló N., Brambilla P., Crespo-Facorro B., Deco G. (UPF), and Fañanás L
Published in Scientific Reports, 2016 November 28
Timothée Proix, Andreas Spiegler (AMU), Michael Schirner, Simon Rothmeier, Petra Ritter, Viktor K. Jirsa (AMU)
Published in NeuroImage, 2016 November 15
Effect of Ionic Diffusion on Extracellular Potentials in Neural Tissue
Geir Halnes, Tuomo Mäki-Marttunen, Daniel Keller, Klas H. Pettersen, Ole A. Andreassen, Gaute T. Einevoll (NMBU)
Published in PLoS Computational Biology, 2016 November 7
Andrei Maksimov, Sacha J. van Albada (JUELICH), and Markus Diesmann (JUELICH)
Published in ReScience, 2016 October 17
Viktor Müller, Dionysios Perdikis, Timo von Oertzen, Rita Sleimen-Malkoun, Viktor Jirsa (AMU) and Ulman Lindenberger
Published in Frontiers in Computational Neuroscience, 2016 October 17
Identifying Anatomical Origins of Coexisting Oscillations in the Cortical Microcircuit.
Bos H, Diesmann M (JUELICH), Helias M (JUELICH)
Published in PLoS Computational Biology, October 13 2016
Unique membrane properties and enhanced signal processing in human neocortical neurons
Eyal G (HUJI), Verhoog MB, Testa-Silva G, Deitcher Y, Lodder JC, Benavides-Piccione R,
Morales J, DeFelipe J, de Kock CP, Mansvelder HD, Segev I (HUJI)
Published in eLife, October 6 2016
Andreas Spiegler (AMU), Enrique C.A. Hansen, Christophe Bernard, Anthony R. McIntosh and Viktor K. Jirsa (AMU)
Published in eNeuro, 2016 September 21
Efficient Integration of Coupled Electrical-Chemical Systems in Multiscale Neuronal Simulations
Ekaterina Brocke, Upinder S. Bhalla, Mikael Djurfeldt, Jeanette Hellgren Kotaleski (KTH) and Michael Hanke
Published in Frontiers in Computational Neuroscience, 2016 September 12
Correlated Fluctuations in Strongly Coupled Binary Networks Beyond Equilibrium.
David Dahmen, Hannah Bos, and Moritz Helias (JUELICH)
Published in Physical Review E, August 19, 2016
Supervised Learning in Spiking Neural Networks for Precise Temporal Encoding
Brian Gardner (SURREY), André Grüning (SURREY)
Published in PLoS One, 2016 August 17
A Tractable Method for Describing Complex Couplings between Neurons and Population Rate
C. Gardella, O. Marre, T. Mora
Published in eNeuro, 2016 August 17
High-frequency oscillations in human and monkey neocortex during the wake-sleep cycle
Michel Le Van Quyen, Lyle Muller, Bartosz Telenczuk (CNRS), Eric Halgren, Sydney S. Cash, Nicholas G. Hatsopoulos, Nima Dehghani, and Alain Destexhe (CNRS)
Published in PNAS, 2016 August 16
Synchronous Spike Patterns in Macaque Motor Cortex during an Instructed-Delay Reach-to-Grasp Task
Emiliano Torre, Pietro Quaglio (JUELICH), Michael Denker(JUELICH), Thomas Brochier, Alexa Riehle, and Sonja Grün (JUELICH)
Published in The Journal of Neuroscience, 2016 August 10
Resting state brain dynamics and its transients: a combined TMS-EEG study
Mireille Bonnard, Sophie Chen, Jérôme Gaychet, Marcel Carrere, Marmaduke Woodman, Bernard Giusiano & Viktor Jirsa (AMU)
Published in Scientific Reports, 2016 August 4
Ulisse Ferrari (UPMC)
Published in Physical Review E, 2016 August 1
Handling Metadata in a Neurophysiology Laboratory.
Zehl L, Jaillet F, Stoewer A, Sobolev A, Wachtler T, Brochier T, Riehle A, Denker M (JUELICH), Grün S. (JUELICH)
Pubished in Frontiers in Neuroinformatics, 19 July 2016
ASSET: Analysis of Sequences of Synchronous Events in Massively Parallel Spike Trains
Emiliano Torre, Carlos Canova (JUELICH), Michael Denker (JUELICH), George Gerstein, Moritz Helias (JUELICH), Sonja Grün (JUELICH)
Published in PLoS Computational Biology, 2016 July 15
Hybrid scheme for modeling local field potentials from point-neuron networks
Espen Hagen, David Dahmen, Maria L. Stavrinou, Henrik Lindén, Tom Tetzlaff, Sacha J. van Albada (JUELICH), Sonja Grün (JUELICH), Markus Diesmann (JUELICH), Gaute T. Einevoll (NMBU)
Published in Cerebral CORTEX, 2016 July 12
Heterogeneity of time delays determines synchronization of coupled oscillators
Spase Petkoski (AMU), Andreas Spiegler (AMU), Timothée Proix, Parham Aram, Jean-Jacques Temprado , and Viktor K. Jirsa (AMU)
Published in Physical Review E, 2016 July 11
Y. Zerlaut, B.Telenczuk (CNRS), C.Deleuze, T.Bal, G.Ouanounou and A. Destexhe (CNRS)
Published in The Journal of Physiology, 2016 July 1
Dmytro Grytskyy, Markus Diesmann (JUELICH), and Moritz Helias (JUELICH)
Published in Physical Review E, June 6, 2016
Active subthreshold dendritic conductances shape the local field potential
Torbjørn V. Ness (NMBU), Michiel W. H. Remme and Gaute T. Einevoll (NMBU)
Published in The journal of Physiology, 2016 April 15
Heidi Teppola, Jertta-Riina Sarkanen, Tuula O. Jalonen and Marja-Leena Linne (TUT)
Published in Neurochemichal Research, 2016 April
Functional Mechanisms of Recovery after Chronic Stroke: Modeling with the Virtual Brain
Maria Inez Falcon, Jeffrey D. Riley, Viktor Jirsa (AMU), Anthony R. McIntosh, E. Elinor Chen, and Ana Solodkin
Published in eNeuro, 2016 March 23
Dynamic Balance of Excitation and Inhibition in Human and Monkey Neocortex
Nima Dehghani, Adrien Peyrache, Bartosz Telenczuk (CNRS), Michel Le Van Quyen, Eric Halgren, Sydney S. Cash, Nicholas G. Hatsopoulos & Alain Destexhe (CNRS)
Published in Scientific Reports, 2016 March 16
Matthieu Gilson, Ruben Moreno-Bote, Adrián Ponce-Alvarez, Petra Ritter, Gustavo Deco (UPF)
Published in PLoS Computational Biology, 2016 March 16
Somato-dendritic Synaptic Plasticity and Error-backpropagation in Active Dendrites.
Schiess M, Urbanczik R and Senn W (UBERN)
Published in PLoS Computational Biology, 2016 February 3
Jean-Marie Gomes, Claude Bédard, Silvana Valtcheva, Matthew Nelson, Vitalia Khokhlova, Pierre Pouget, Laurent Venance, Thierry Bal and Alain Destexhe (CNRS)
Published in Biophysical Journal, 2016 January 5
Peer-reviewed journal publications
Multiplexed computations in retinal ganglion cells of a single type
Deny S, Ferrari U (UPMC), Mace E, Yger P, Caplette R, Picaud S, Tkacik G, Marre O (UPMC)
Published in Nature Communications, 2017 December 8
Mario Senden, Niels Reuter, Martijn P. van den Heuvel, Rainer Goebel, Gustavo Deco (UPF), Matthieu Gilson
Published in Human Brain Mapping, 2017 December 8
Dynamical response properties of neocortical neurons to conductance-driven time-varying inputs
Linaro, D., Biró, I. and Giugliano, M. (UA)
Published in European Journal of Neuroscience, 2017 December 2
Predicting Non-Linear Dynamics: A Stable Local Learning Scheme for Recurrent Spiking Neural Networks
Gilra, Aditya, and Wulfram Gerstner (EPFL)
Published in eLife, 2017 November 27
Tuomo Mäki-Marttunen, Glenn T. Lines, Andrew G. Edwards, Aslak Tveito, Anders M. Dale, Gaute T. Einevoll (NMBU) & Ole A. Andreassen
Published in Nature translational Pyschiatry, 2017 November 17
Yair Deitcher (HUJI), Guy Eyal (HUJI), Lida Kanari, Matthijs B. Verhoog, Guy Antoine Atenekeng Kahou, Huibert D. Mansvelder, Christiaan P.J. de Kock, and Idan Segev (HUJI)
Published in Cerebral Cortex, 2017 November
Is the Extracellular Impedance High and Nonresistive in Cerebral Cortex?
Claude Bédard and Alain Destexhe (CNRS and EITN)
Published in Biophysical Journal (comment to the Editor), 2017 October 3
Bistability, non-ergodicity, and inhibition in pairwise maximum-entropy models
Vahid Rostami, PierGianLuca Porta Mana, Sonja Grün (JUELICH), Moritz Helias (JUELICH)
Published in PloS Computational Biology, 2017 October 2
Resting state networks in empirical and simulated dynamic functional connectivity
Katharina Glomb, Adrián Ponce-Alvarez, Matthieu Gilson, Petra Ritter, Gustavo Deco
Published in NeuroImage, 2017 October 1
Memory States and Transitions between Them in Attractor Neural Networks
Stefano Recanatesi (WEIZMANN), Mikhail Katkov (WEIZMANN) and Misha Tsodyks (WEIZMANN)
Published in Neural Computation, 2017 October
Uncovering the underlying mechanisms and whole-brain dynamics of deep brain stimulation for Parkinson’s disease
Victor M. Saenger, Joshua Kahan, Tom Foltynie, Karl Friston, Tipu Z. Aziz, Alexander L. Green, Tim J. van Hartevelt , Joana Cabral, Angus B. A. Stevner, Henrique M. Fernandes, Laura Mancini, John Thornton, Tarek Yousry, Patricia Limousin, Ludvic Zrinzo, Marwan Hariz, Paulo Marques, Nuno Sousa, Morten L. Kringelbach & Gustavo Deco (UPF)
Published in Scientific reports, 2017 August 29
Kai Du, Yu-Wei Wu, Robert Lindroos, Yu Liu, Balázs Rózsa, Gergely Katona, Jun B. Ding, and Jeanette Hellgren Kotaleski (KTH)
Published in PNAS, 2017 August 21
Joana Cabral, Diego Vidaurre, Paulo Marques, Ricardo Magalhães, Pedro Silva Moreira, José Miguel Soares, Gustavo Deco (UPF), Nuno Sousa & Morten L. Kringelbach
Published in Scientific reports, 2017 July 11
Refractoriness Accounts for Variable Spike Burst Responses in Somatosensory Cortex
Bartosz Teleńczuk (CNRS UNIC EITN), Richard Kempter, Gabriel Curio and Alain Destexhe (CNRS & EITN)
Published in eNeuro, 2017 August 14
Population density equations for stochastic processes with memory kernels
Yi Ming Lai (ULEEDS) and Marc de Kamps (ULEEDS)
Published in Physical Review E., 2017 June 20
Shirley Mark, Sandro Romani, Karel Jezek, Misha Tsodyks (WEIZMANN)
Published in Hippocampus, 2017 June 14
Francesca Melozzi (AMU), Marmaduke M. Woodman, Viktor K. Jirsa (AMU) and Christophe Bernard
Published in eNeuro, 2017 June 12
The dynamics of resting fluctuations in the brain: metastability and its dynamical cortical core
Gustavo Deco (UPF), Morten L. Kringelbach, Viktor K. Jirsa (AMU) & Petra Ritter
Published in Scientific Reports, 2017 June 8
Enhanced Responsiveness and Low-Level Awareness in Stochastic Network States
Yann Zerlaut, Alain Destexhe (CNRS UNIC EITN)
Published in Neuron, 2017 June 7
Hierarchy of Information Processing in the Brain: A Novel ‘Intrinsic Ignition’ Framework
Gustavo Deco (UPF), Morten L. Kringelbach
Published in Neuron, 2017 June 7
Symmetry Breaking in Space-Time Hierarchies Shapes Brain Dynamics and Behavior
Ajay S. Pillai, Viktor K. Jirsa (AMU)
Published in Neuron, 2017 June 7
Memory Retrieval from First Principles
M. Katkov (WEIZMANN), S. Romani, M. Tsodyks (WEIZMANN)
Published in Neuron, 2017 June 7
Improving voltage-sensitive dye imaging: with a little help from computational approaches
Sandrine Chemla, Lyle Muller, Alexandre Reynaud, Sylvain Takerkart, Alain Destexhe (CNRS & EITN), Frédéric Chavane
Published in Neurophotonics, 2017 May 19
Random versus maximum entropy models of neural population activity
Ulisse Ferrari (UPMC), Tomoyuki Obuchi, and Thierry Mora
Published in Physical Review E, 2017 April 27
Switch from ambient to focal processing mode explains the dynamics of free viewing eye movements.
Junji Ito (JUELICH), Yukako Yamane, Mika Suzuki, Pedro Maldonado, Ichiro Fujita, Hiroshi Tamura & Sonja Grün (JUELICH)
Published in Scientific Reports, 2017 April 24
Tilo Schwalger, Moritz Deger & Wulfram Gerstner (EPFL)
Published in PLoS Computational Biology, 2017 April 19
R. G. Bettinardi, G. Deco (UPF), V. M. Karlaftis, T. J. Van Hartevelt, H. M. Fernandes, Z. Kourtzi, M. L. Kringelbach, and G. Zamora-López (UPF)
Published in Chaos, 2017 April 17
Yann Zerlaut & Alain Destexhe (CNRS & EITN)
Published in PLoS Computational Biology, 2017 April 14
Interplay between periodic stimulation and GABAergic inhibition in striatal network oscillations
Jovana J. Belić (KTH), Arvind Kumar, Jeanette Hellgren Kotaleski (KTH)
Published in PloS One, 2017 April 6
The temporal paradox of Hebbian learning and homeostatic plasticity
Friedemann Zenke, Wulfram Gerstner (EPFL) and Surya Ganguli
Published in Current Opinions in Neurobiology, 2017 April
Ion diffusion may introduce spurious current sources in current-source density
Geir Halnes, Tuomo Mäki-Marttunen, Klas H. Pettersen, Ole A. Andreassen, and Gaute T. Einevoll (NMBU)
Published in Journal of Neurophysiology, 2017 March 15
Hebbian plasticity requires compensatory processes on multiple timescales
Friedemann Zenke and Wulfram Gerstner (EPFL)
Published in Philosophical Transactions B, 2017 March 5
Recent progress in multi-electrode spike sorting methods
Baptiste Lefebvre, Pierre Yger & Olivier Marre (UPMC)
Published in Journal of Physiology - Paris, 2017 March 2
Hopf bifurcation in a nonlocal nonlinear transport equation stemming from stochastic neural dynamics
Audric Drogoul & Romain Veltz (INRIA)
Published in Chaos, 2017 February 22
Reproducibility and comparability of computational models for astrocyte calcium excitability
Tiina Manninen (TUT), Riikka Havela (TUT) & Marja-Leena Linne (TUT)
Published in Frontiers in Neuroinformatics, 2017 February 21
Claude Bedard, Jean-Marie Gomes, Thierry Bal & Alain Destexhe (CNRS & EITN)
Published in Journal of integrative Neuroscience
Individual brain structure and modelling predict seizure propagation.
Proix T., Bartolomei F., Guye M., Jirsa V. (AMU).
Published in Brain, 2017 February 4
Fundamental activity constraints lead to specific interpretations of the connectome
Schuecker J, Schmidt M, van Albada SJ (JUELICH), Diesmann M (JUELICH), Helias M. (JUELICH)
Published in PLoS Computational Biology, 2017 February 1
Power-law statistics and universal scaling in the absence of criticality
Touboul, J. and Destexhe, A. (CNRS & EITN)
Published in Physical Review E, 2017 January 31
Synaptic correlates of working memory capacity.
Y. Mi, M. Katkov & M. Tsodyks (WEIZMANN).
Published in Neuron, 2017 january 18
Stéphanie Miceli, Torbjørn V. Ness (NMBU), Gaute T Einevoll (NMBU) & Dirk Schubert
Published in eNeuro, 2017 January 16
The Virtual Epileptic Patient: Individualized whole-brain models of epilepsy spread
V.K. Jirsa (AMU), T. Proix, D. Perdikis, M.M. Woodman, H. Wang, J. Gonzalez-Martinez, C. Bernard, C. Bénar, M. Guye, P. Chauvel, F. Bartolomei
Published in NeuroImage, 2017 January 15
Multiple Choice Neurodynamical Model of the Uncertain Option Task
Andrea Insabato, Mario Pannunzi, Gustavo Deco (UPF)
Published in PLoS Computational Biology, 2017 January 11
Local field potentials primarily reflect inhibitory neuron activity in human and monkey cortex
Bartosz Telenczuk (CNRS UNIC EITN), Nima Dehghani, Michel Le Van Quyen, Sydney S Cash, Eric Halgren, Nicholas G Hatsopoulos & Alain Destexhe (CNRS UNIC EITN)
Published in Scientific Reports, 2017 January 11
Conference proceedings
Pairwise Ising Model Analysis of Human Cortical Neuron Recordings
Trang-Anh Nghiem, Olivier Marre, Alain Destexhe, Ulisse Ferrari
GSI 2017: Geometric Science of Information
Peer-reviewed journal publications
Gutzen R., Von Papen M., Trensch G., Quaglio, Grün S., Denker M.
Published in Frontiers in Neuroinformatics, 2018 December 19
Large and fast human pyramidal neurons associate with intelligence
Natalia A Goriounova is a corresponding autor, Djai B Heyer, René Wilbers, Matthijs B Verhoog, Michele Giugliano, Christophe Verbist, Joshua Obermayer, Amber Kerkhofs, Harriët Smeding, Maaike Verberne, Sander Idema, Johannes C Baayen, Anton W Pieneman, Christiaan PJ de Kock, Martin Klein, Huibert D Mansvelder
Published in eLife, 2018 December 18
Espen Hagen, Solveig Naess, Torbjorn V. Ness, Gaute T. Einevoll
Published in Frontiers in Neuroinformatics, 2018 December 18
Tomasz Gorski, Romain Veltz, Mathieu Galtier, Helissande Fragnaud, Jennifer S. Goldman, Bartosz Telenczuk, Alain Destexhe
Published in Journal of Computational Neuroscience, 2018 December 13
Alterations in Schizophrenia-associated genes can lead to increased power in delta oscillations
Tuomo Mäki-Marttunen, Florian Krull, Francesco Bettella, Espen Hagen, Solveig Næss, Torbjørn V Ness, Torgeir Moberget, Torbjørn Elvsåshagen, Christoph Metzner, Anna Devor, Andrew G Edwards, Marianne Fyhn, Srdjan Djurovic, Anders M Dale, Ole A Andreassen, Gaute T Einevoll
Published in Cerebral Cortex, 2018 November 22
Optimal sequence memory in driven random networks
Jannis Schuecker, Sven Goedeke, and Moritz Helias
Published in Physical Review X 8, 2018 November 14
VIOLA - A multi-purpose and web-based visualization tool for neuronal-network simulation output
Johanna Senk, Corto Carde, Espen Hagen, Torsten W. Kuhlen, Markus Diesmann, and Benjamin Weyers
Published in Frontiers in Neuroinformatics, 2018 November 8
A simple model for low variability in neural spike trains
Ulisse Ferrari, Stéphane Deny, Olivier Marre, Thierry Mora
Published in Neural Computation, 2018 November 1
Neural timing of stimulus events with microsecond precision
Jinhong Luo, Silvio Macias, Torbjorn V. Ness, Gaute T. Einevoll, Kechen Zhang, Cynthia F. Moss
Published in Plos Computational Biology, 2018 October 26
Schmidt M, Bakker R, Shen K, Bezgin G, Diesmann M, van Albada SJ
Published in Plos Computational Biology, 2018 October 18
Separating intrinsic interactions from extrinsic correlations in a network of sensory neurons
Ulisse Ferrari, Stéphane Deny, Matthew Chalk, Gašper Tkačik,Olivier Marre, Thierry Mora
Published in Physical Review, 2018 October 17
G. Deco, J. Cruzat, J. Cabral, G.M.Knudsen, R.L. Carhart-Harris, P.C. Whybrow, N.K. Logothetis, and M. L. Kringelbach
Published in Current Biology, 2018 September 27
Takashi Owaki, Michel Vidal-Naquet, Yunjun Nam, Go Uchida, Takayuki Sato, Hideyuki Câteau, Shimon Ullman, Manabu Tanifuji
Published in Plos One, 2018, September 20
Model-Based Spatial Navigation in the Hippocampus-Ventral Striatum Circuit: A Computational Analysis
Ivilin Stoianov, Cyriel Pennartz, Carien Lansink and Giovanni Pezzulo
Published in Plos Computational Biology, 2018 September 19
Alessio P. Buccino, Michael Kordovan, Torbjørn V. Ness, Benjamin Merkt, Philipp D. Häfliger, Marianne Fyhn, Gert Cauwenberghs, Stefan Rotter, and Gaute T. Einevoll
Published in Journal of Physiology, 2018 September 05
A neural-level model of spatial memory and imagery
Andrej Bicanski and Neil Burgess
Published in eLife, 2018 September 4
Firing-rate models for neurons with a broad repertoire of spiking behaviors
Thomas Heiberg T., Kriener B., Tetzlaff T., Einevol G.T., and Plesser H.E.
Published in Journal of Computational Neuroscience, 2018 August 27
Expansion of the effective action around non-Gaussian theories
Tobias Kühn and Moritz Helias
Published in Journal of Physics A: Mathematical and Theoretical, 2018 August 10
Real-time visuomotor behavior and electrophysiology recording setup for use with humans and monkeys
Marcel Jan de Haan, Thomas Brochier, Sonja Grün, Alexa Riehle, Frédéric V. Barthélemy
Published in Journal of Neurophysiology, 2018 August 01
Wulfram Gerstner, Marco Lehmann, Vasiliki Liakoni, Dane Corneil and Johanni Brea
Published in Frontiers in Neural Circuits, 2018 July 31
Spiking neurons with short-term synaptic plasticity form superior generative networks
Luziwei Leng, R. Martel, O. Breitwieser, I. Bytschok, W. Senn, J. Schemmel, K. Meier, and M.A. Petrovici
Published in Scientific Reports, 2018 July 13
Behavioral context determines network state and variability dynamics in monkey motor cortex
Alexa Riehle, Thomas Brochier, Martin Nawrot, and Sonja Grün
Published in Frontiers in Neural Circuits, 2018 July 12
A. Maksimov, M. Diesmann (JUELICH), S.J. van Albada (JUELICH)
Published in Frontiers in Computational Neuroscience, 2018 July 10
Spase Petkoski, J. Matias Palva, Viktor K. Jirsa
Published in Plos Computational Biology, 2018 July 10
Hesam Setareh, Moritz Deger, Wulfram Gerstner (EPFL)
Published in Plos Computational Biology, 2018 July 6
Trang-Anh Nghiem, Bartosz Telenczuk, Olivier Marre, Alain Destexhe, and Ulisse Ferrari
Published in Physical Review E, 2018 July 5
Human Cortical Pyramidal Neurons: From Spines to Spikes via Models
Guy Eyal (HUJI), Matthijs B. Verhoog, Guilherme Testa-Silva, Yair Deitcher, Ruth Benavides-Piccione, Javier DeFelipe, Christiaan P. J. de Kock, Huibert D. Mansvelder and Idan Segev (HUJI)
Published in Frontiers in Cellular Neuroscience, 2018 June 29
h-Type Membrane Current Shapes the Local Field Potential from Populations of Pyramidal Neurons
Torbjørn V. Ness, Michiel W.H. Remme and Gaute T. Einevoll
Published in Journal of Neuroscience, 2018 June 27
Bijan Pesaran, Martin Vinck, Gaute T. Einevoll, Anton Sirota, Pascal Fries, Markus Siegel, Wilson Truccolo, Charles E. Schroeder & Ramesh Srinivasan
Published in Nature Neuroscience, 2018 June 25
Spatial cell firing during virtual navigation of open arenas by head-restrained mice
Chen G, King JA, Lu Y, Cacucci F, Burgess N (UCL)
Published in eLife, 2018 June 18
Image interpretation above and below the object level
Guy Ben-Yosef, Shimon Ullman
Published in Royal Society Interface Focus, 2018 June 15
Single-layer graphene modulates neuronal communication and augments membrane ion currents
N. P. Pampaloni, M. Lottner, M. Giugliano (UA), A. Matruglio, F. D’Amico, M. Prato, J. A. Garrido, L. Ballerini & D. Scaini
Published in Nature Nanotechnology, 2018 June 11
S. J. van Albada (Jülich), A. G. Rowley, J. Senk, M. Hopkins, M. Schmidt, A. B. Stokes, D.R. Lester, M. Diesmann (Jülich), S. B. Furber
Published in Frontiers in Neuroscience, 2018 May 23
SV. Pallarés, A. Insabato, A. Sanjuán, S. Kühn, D. Mantini, G. Deco, and M. Gilson
Published in NeuroImage, 2018 May 22
Contribution of the Axon Initial Segment to Action Potentials Recorded Extracellularly
Maria Teleńczuk (CNRS), Romain Brette, Alain Destexhe (CNRS) and Bartosz Teleńczuk (CNRS)
Published in eNeuro, 2018 May 21
Framework based on communicability and flow to analyze complex network dynamics
Matthieu Gilson (UPF), Nikos E. Kouvaris, Gustavo Deco (UPF), Gorka Zamora-López (UPF)
Published in Phys.Rev. E, 2018 May 02
On a Recursive Construction of Circular Paths and the Search for π on the Integer Lattice ℤ2
Michelle Rudolph-Lilith (CNRS)
Published in Discrete & Computational Geometry, 2018 April
Tiina Manninen, Jugoslava Aćimović, Riikka Havela, Heidi Teppola, Marja-Leena Linne
Published in Frontiers in Neuroinformatics, 2018 April 24
Pierre Yger, Giulia LB Spampinato, Elric Esposito, Baptiste Lefebvre, Stéphane Deny, Christophe Gardella, Marcel Stimberg, Florian Jetter, Guenther Zeck, Serge Picaud, Jens Duebel, Olivier Marre (UPMC)
Published in eLife, 2018 April 19
Computational Models for Calcium-Mediated Astrocyte Functions
Tiina Manninen (TUT), Riikka Havela (TUT), Marja-Leena Linne (TUT)
Published in Frontiers in Computational Neuroscience, 2018 April 4
Andreas Daffertshofer, Robert Ton, Bastian Pietras, Morten L. Kringelbach, and Gustavo Deco
Published in Neuroimage, 2018 April 4
Multicontact Co-operativity in Spike-Timing–Dependent Structural Plasticity Stabilizes Networks
Moritz Deger, Alexander Seeholzer, Wulfram Gerstner (EPFL)
Published in Cerebral Cortex, 2018 April 1
Blindfold learning of an accurate neural metric
Christophe Gardella, Olivier Marre, Thierry Mora
Published in PNAS, 2018 March 27
An integrate-and-fire model to generate spike trains with long-range dependence
Alexandre Richard, Patricio Orio, Etienne Tanré (Inria)
Published in Journal of Computational Neuroscience, 2018 March 24
Timothée Proix, Viktor K. Jirsa (AMU), Fabrice Bartolomei, Maxime Guye, Wilson Truccolo
Published in Nature Communications, 2018 March 14
Pablo Martínez-Cañada, Milad Hobbi Mobarhan, Geir Halnes, Marianne Fyhn, Christian Morillas, Francisco Pelayo, Gaute T. Einevoll (NMBU)
Published in PLOS Computational Biology, 2018 February 28
Extremely Scalable Spiking Neuronal Network Simulation Code: From Laptops to Exascale Computers
Jakob Jordan, Tammo Ippen, Moritz Helias (JUELICH), Itaru Kitayama, Mitsuhisa Sato, Jun Igarashi, Markus Diesmann (JUELICH), Susanne Kunkel
Published in Frontiers in Neuroinformatics, 2018 February 16
Kramers-Kronig relations and the properties of conductivity and permittivity in heterogeneous media.
Claude Bedard and Alain Destexhe (CNRS & EITN)
Published in Journal of Electromagnetic Analysis and Applications, 2018 February
Yann Zerlaut, Sandrine Chemla, Frederic Chavane, Alain Destexhe (CNRS UNIC EITN)
Published in Journal of Computational Neuroscience, 2018 February
Closed-Loop Estimation of Retinal Network Sensitivity by Local Empirical Linearization
Ulisse Ferrari (UMPC), Christophe Gardella, Olivier Marre (UPMC), Thierry Mora
Published in eNeuro, 2018 January 16
Toward a unified theory of efficient, predictive, and sparse coding
Matthew Chalk, Olivier Marre (UPMC), Gašper Tkačik
Published in PNAS, 2018 January 2
Peer-reviewed journal publications
Cellular correlates of wakefulness and slow-wave sleep: evidence for a key role of inhibition
Published in Current Opinion in Physiology,
State-dependent mean-field formalism to model different activity states in conductance based networks of spiking neurons
Published in Physical review, 2019 December 23
Individual structural features constrain the mouse functional connectome
Published in
Bridging single neuron dynamics to global brain states
Published in Frontiers in Systems Neuroscience, 2019 December 6
Published in Communications Physics, 2019 November 14
One-shot learning and behavioral eligibility traces in sequential decision making
Published in eLIFE, 2019 November 11
Published in IEEE Signal Processing, 2019 November 5
Effective connectivity in autism
Published in Autism Research, 2019 October 27
Holistic recollection via pattern completion involves hippocampal subfield CA3
Published in the Journal of Neuroscience,
Electrophysiological monitoring of inhibition in mammalian species, from rodents to humans
Correlation transfer by layer 5 cortical neurons under recreated synaptic inputs in vitro
Published in The Journal of Neuroscience, 2019 September 25
The hidden repertoire of brain dynamics and dysfunction
Published in Network Neuroscience, 2019 September 23
Published in Frontiers in Cellular Neuroscience, 2019 September 6
Awakening: Predicting external stimulation to force transitions between different brain states
Published in PNAS, 2019 August 19
Navigating with grid and place cells in cluttered environments
Published in Scientific reports, 2019 August 12
Published in Frontiers in Psychiatry, 2019 August 6
Detection and evaluation of bursts in terms of novelty and surprise
Published in Mathematical Biosciences and Engineering, 2019 July 31
Transmission time delays organize the brain network synchronization
Published in Philosophical Transactions of the Royal Society, 2019 July 22
Long-time behavior of a mean-field model of interacting neurons
Emergence of hierarchical organization in memory for random material
Published in Scientific reports, 2019 July 18
Network analysis of whole-brain fMRI dynamics: A new framework based on dynamic communicability
Published in NeuroImage, 2019 July 12
Published in Ecological Psychology, 2019 July 11
Evaluation of spike sorting algorithms: Simulations and application to human Subthalamic Nucleus recordings
Published in Neuroscience, 2019 July 9
Differential Structure of Hippocampal CA1 Pyramidal Neurons in the Human and Mouse
Published in Cerebral Cortex, 2019 July 2
Published in PLOS Biology, 2019 July 1
Optimization of surgical intervention outside the epileptogenic zone in the Virtual Epileptic Patient (VEP)
Published in PLOS Computational Biology, 2019 June 26
Second type of criticality in the brain uncovers rich multiple-neuron dynamics
Published in PNAS, 2019 June 25
Biologically plausible deep learning - But how far can we go with shallow networks?
Published in Neural Networks, 2019 June 20
Published in Network Neuroscience , 2019 June 7
Caching Mechanisms for Habit Formation in Active Inference
Published in Neurocomputing, 2019 June 4
Published in Journal in Neuroscience, 2019 May 29
Planning at decision time and in the background during spatial navigation
G Pezzulo, F Donnarumma, D Maisto, I Stoianov
Published in Current Opinion in Behavioral Sciences, 2019 May 24
The scientific case for brain simulations
Gaute T.Einevoll, Alain Destexhe, Markus Diesmann, Sonja Grun, Viktor Jirsa, Marc de Kamps, Michele Migliore, Torbjorn V; Ness, Hans E. Plesser, and Felix Schurmann
Published in Neuron, 2019 May 22
Primate Amygdala Neurons Simulate Decision Processes of Social Partners
Fabian Grabenhorst, Raymundo Báez-Mendoza, Wilfried Genest, Gustavo Deco, Wolfram Schultz
Published in Cell, 2019 May 02
A. Seeholzer, M. Deger, and W. Gerstner
Published in PLOS Computational Biology, 2019 April 19
Single-cell and neuronal network alterations in an in vitro model of fragile X syndrome
Anastasiya Moskalyuk ,Sebastiaan Van De Vijver, Peter Verstraelen, Winnok H De Vos, R Frank Kooy, Michele Giugliano
Published in Cerebral Cortex, 2019 April 8
Giovanni Pezzulo and Stefano Nolfi
Published in Entropy, 2019 March 30
Biologically realistic mean-field models of conductance-based networks of spiking neurons with adaptation
Matteo di Volo, Alberto Romagnoni, Cristiano Capone, Alain Destexhe
Published in Neural Computation, 2019 March 15
Computational geometry for modeling neural populations: From visualization to simulation
Marc de Kamps, Mikkel Lepperod, and Yi Ming Lai
Published in PLOS Computational Biology, 2019 March 4
A Computational Model of Visual Recognition Memory via Grid Cells
Andrej Bicanski and Neil Burgess
Published in Current Biology, 2019 March 3
How does the presence of neural probes affect extracellular potentials?
Alessio Paolo Buccino, Miroslav Kuchta, Karoline Horgmo Jæger, Torbjørn Vefferstad Ness, Pierre Berthet, Kent-Andre Mardal, Gert Cauwenberghs, and Aslak Tveito
Published in Journal of Neural Engineering, 2019 February 26
Controlling seizure propagation in large-scale brain networks
Simona Olmi, Spase Petkoski, Maxime Guye, Fabrice Bartolomei, and Viktor Jirsa
Published in PLOS Computational Biology, 2019 February 25
Peer-reviewed conference proceedings
Projection-based order reduction of a nonlinear biophysical neuronal network model
M. Lehtimäki, L. Paunonen, and M. Linne
Published in IEEE 58th Conference on Decision and Control (CDC), 2020
Coordinated hippocampal-entorhinal replay as structural inference
Published in Neural Information Processing Systems Conference, 2019 November 20
Discovering unexpected local nonlinear interactions in scientific black-box models
Published in Proceedings of the 25th ACM SIGKDD International Conference on Knowledge Discovery and Data mining (KDD2019), 2019 August 04 - 08
Constraints on sequence processing speed in biological neuronal networks
Published in ICONS '19: Proceedings of the International Conference on Neuromorphic Systems, 2019 July 23-25
Peer-reviewed journal publications
Manninen T, Saudargiene A, Linne M-L
Published in PLOS Computational Biology, 2020 November 10
Signature of Consciousness in Brain-Wide Synchronization Patterns of Monkey and Human fMRI Signals
Gerald Hahn,Gorka Zamora-López, Lynn Uhrig, Enzo Tagliazucchi, HelmutLaufs,Dante Mantini, Morten Kringelbach, Bechir Jarraya, Gustavo Deco
Published in NeuroImage, 2020 November 01
Matthieu Gilson, David Dahmen, Rubén Moreno-Bote, Andrea Insabato, Moritz Helias
Published in PLOS Computational Biology, 2020 October 12
Momentum-dependence in the infinitesimal Wilsonian renormalization group
Moritz Helias
Published in Journal of Physics A: Mathematical and Theoretical, 2020 October 09
Brain States and Transitions: Insights from Computational Neuroscience
Morten L. Kringelbach, Gustavo Deco
Published in Cell Reports, 2020 September 08
A kernel-based method to calculate local field potentials from networks of spiking neurons
Published in Journal of Neuroscience Methods, 2020 July 17
Published in Frontiers in Systems Neuroscience, 2020 July 7
Published in the Journal of Physiology, 2020 June 29
Published in NeuroImage, Volume 217, 2020
Alain Destexhe
Published on Zenodo, 2020 May 30
Conditions for wave trains in spiking neural networks
Published in Physical Review Research, 2020 May 14
Dynamic coupling of whole-brain neuronal and neurotransmitter systems
Published in Proceedings of the National Academy of Sciences, 2020 April 28
Model-based whole-brain effective connectivity to study distributed cognition in health and disease
Published in Network Neuroscience, 2020
Capacity of the covariance perceptron
David Dahmen, Matthieu Gilson, Moritz Helias
Published in Journal of Physics A: Mathematical and Theoretical, 2020 March 24
Mallory Carlu, Omar Chehab, Leonardo Dalla Porta, Damien Depannemaecker, Charlotte Héricé, Maciej Jedynak, Elif Köksal Ersöz, Paolo Muratore, Selma Souihel, Cristiano Capone, Yann Zerlaut, Alain Destexhe, Matteo di Volo
Published in Journal of Neurophysiology, 2020 March 23
Adrian Ponce-Alvarez, Gabriela Mochol, Ainhoa Hermoso-Mendizabal, Jaime de la Rocha, Gustavo Deco
Published in eLife, 2020 March 17
Lascone DM, Li Y, Sümbül U, Doron M, Chen H, Andreu V, Goudy F, Blockus H, Abbott LF, Segev I, Peng H, Polleux F
Published in Neuron, 2020 March 12
Estimation of neural network model parameters from local field potentials (LFPs)
Jan-Eirik W. Skaar, Alexander J. Stasik, Espen Hagen, Torbjørn V. Ness, Gaute T. Einevoll
Published in PLOS Computational Biology, 2020 March 10
Manel Vila-Vidal, Carmen Pérez Enríquez, Alessandro Principe, Rodrigo Rocamora, Gustavo Deco, and Adrià Tauste Campo
Published in NeuroImage, 2020 March 1
Beyond the disconnectivity hypothesis of schizophrenia
Edmund T Rolls, Wei Cheng, Matthieu Gilson, Weikang Gong, Gustavo Deco, Chun-Yi Zac Lo, Albert C Yang, Shih-Jen Tsai, Mu-En Liu, Ching-Po Lin, and Jianfeng Feng
Published in Cerebral Cortex, March 2020
Natural rhythms of periodic temporal attention
Arnaud Zalta, Spase Petkoski, and Benjamin Morillon
Published in Nature Communications, 2020 February 26
Kenza El Houssaini, Christophe Bernard, Viktor K Jirsa
Published in eNeuro, 2020 February 17
Advantages and detection of phase coding in the absence of rhythmicity
Daniel Bush, Neil Burgess
Published in Hippocampus, 2020 February 17
Cholinergic switch between two types of slow waves incerebral cortex
Trang-Anh Nghiem, Nuria Tort-Colet, Tomasz Gorski, Ulisse Ferrari, Shaylesh Moghimyfiroozabad, Jennifer S. Goldman, Bartosz Telenczuk, Cristiano Capone, Thierry Bal, Matteo di Volo, and Alain Destexhe
Published in Cerebral Cortex, 2020 January 28
Fundamental law of memory recall
Michelangelo Naim, Mikhail Katkov, Sandro Romani, and Misha Tsodyks
Published in Physical Review Letters, 2020 January 10
Spherical-harmonics mode decomposition of neural field equation
Daniele Daini, Giacomo Ceccarelli, Enrico Cataldo, and Viktor Jirsa
Published in American Physical Society, 2020 January 6
Peer-reviewed conference proceedings
Accelerated simulation of a neuronal population via mathematical model order reduction
DM. Lehtimäki, I. Seppälä, L. Paunonen, and M. Linne
Published in IEEE International Conference on Artificial Intelligence Circuits and Systems (AICAS), 2020, pp. 118-122
Peer-reviewed journal publications
Multimodal Representation Learning for Place Recognition Using Deep Hebbian Predictive Coding
Martin J. Pearson, Shirin Dora, Oliver Struckmeier, Thomas C. Knowles, Ben Mitchinson, Kshitij Tiwari, Ville Kyrki, Sander Bohte and Cyriel M.A. Pennartz
Published in Frontiers in Robotics and AI, 2021 December 13
Microscopic theory of intrinsic timescales in spiking neural networks
Alexander van Meegen and Sacha J. van Albada
Published in Physical Review Research, 2021 October 28
Shirin Dora, Sander M. Bohte and Cyriel M. A. Pennartz
Published in Frontiers in Computational Neuroscience, 2021 July 28
Is there sufficient evidence for criticality in cortical systems?
Alain Destexhe, Jonathan D. Touboul
Published in eNeuro, 2021 April 02
Modulation of intercolumnar synchronization by endogenous electric fields in cerebral cortex
Beatriz Rebollo, Bartosz Telenczuk, Alvaro Navarro-Guzman, Alain Destexhe and Maria V. Sanchez-Vives
Published in Science Advances, 2021 March 03
Viktor Sip, Julia Scholly, Maxime Guye, Fabrice Bartolomei, Viktor Jirsa
Published in PLOS Computational Biology, 2021 February 26
Viktor Sip, Meysam Hashemi, Anirudh N. Vattikonda, Marmaduke M. Woodman, Huifang Wang, Julia Scholly, Samuel Medina Villalon, Maxime Guye, Fabrice Bartolomei, Viktor K. Jirsa
Published in PLOS Computational Biology, 2021 February 17
Signature of consciousness in brain-wide synchronization patterns of monkey and human fMRI signals
Gerald Hahn, Gorka Zamora-López, Lynn Uhrig, Enzo Tagliazucchi, Helmut Laufs, Dante Mantini, Morten L Kringelbach, Bechir Jarraya, Gustavo Deco
Published in NeuroImage, 2021 February 01
Data-driven reduction of dendritic morphologies with preserved dendro-somatic responses
Willem AM Wybo,, Jakob Jordan, Benjamin Ellenberger, Ulisses Marti Mengual, Thomas Nevian, Walter Senn
Published in eLife, 2021 January 26
DVEP atlas: An anatomic and functional human brain atlas dedicated to epilepsy patients
Huifang E. Wang, Julia Scholly, Paul Triebkorn, Viktor Sip, Samuel Medina Villalon, Marmaduke M. Woodman, Arnaud Le Troter, Maxime Guye, Fabrice Bartolomei, Viktor Jirsa
Published in Journal of Neuroscience Methods, 2021 January 15
Sander Lindeman, Sungho Hong, Lieke Kros, Jorge F. Mejias, Vincenzo Romano, Robert Oostenveld, Mario Negrello, Laurens W. J. Bosman, Chris I. De Zeeuw
Published in Proceedings of the National Academy of Sciences, 2021 January 12
Biophysically detailed forward modeling of the neural origin of EEG and MEG signals
Solveig Næss, Geir Halnes, Espen Hagen, Donald J. Hagler, Anders M. Dale, Gaute T. Einevoll, Torbjørn V. Ness
Published in NeuroImage, 2021 January 15
Python code for mean-field model of electric-field interactions in cerebral cortex
Telenczuk, Rebollo, Navarro-Guzman, Sanchez-Vives, Destexhe
Published on Zenodo, 2021 January 11
Revisiting the global workspace orchestrating the hierarchical organization of the human brain
Gustavo Deco, Diego Vidaurre, Morten L. Kringelbach
Published in Nature Human Behaviour, 2021, January 4
Modulation of cortical slow oscillations and complexity across anesthesia levels
Miguel Dasilva, Alessandra Camassa, Alvaro Navarro-Guzman, Antonio Pazienti, Lorena Perez-Mendez, Gorka Zamora-López, Maurizio Mattia, Maria V.Sanchez-Vives
Published in NeuroImage, 2021 January 01
Peer-reviewed journal publications
Fast simulation of a multi-area spiking network model of macaque cortex on an MPI-GPU cluster.
Tiddia G, Golosio B, Albers J, Senk J, Simula F, Pronold J, Fanti V, Pastorelli E, Paolucci PS, van Albada SJ.
Forthcoming in Front Neuroinform
Connectivity concepts in neuronal network modeling.
Senk J, Kriener B, Djurfeldt M, Voges N, Jiang H-J, Schüttler L, Gramelsberger G, Diesmann M, Plesser HE, van Albada SJ.
Forthcoming PLoS Computational Biology
A method to convert neural signals into sound sequences
Alain Destexhe, Luc Foubert
Published in The Journal of the Acoustical Society of America, 2022 June 02
Accelerating Neural ODEs Using Model Order Reduction
M. Lehtimäki, L. Paunonen and M. -L. Linne
Published in IEEE Transactions on Neural Networks and Learning Systems, 2022 May 26
Neuron–Glia Interactions and Brain Circuits
Marja-Leena Linne, Jugoslava Aćimović, Ausra Saudargiene & Tiina Manninen
Chapter published in book Computational Modelling of the Brain, 2022 April 27
Cortical oscillations support sampling-based computations in spiking neural networks
Agnes Korcsak-Gorzo, Andreas Baumbach, Luziwei Leng, Oliver J. Breitwieser, Sacha J. van Albada, Walter Senn, Karlheinz Meier †, Robert Legenstein, Mihai A. Petrovici
Published in PLoS Computational Biology, 2022 March 22
Antonio Pazienti, Andrea Galluzzi, Miguel Dasilva, Maria V. Sanchez-Vives, Maurizio Mattia
Published in IScience, 2022 February 11
Pre-prints: research papers that have not gone through peer-review
Brain Signal Predictions from Multi-Scale Networks using a Linearized Framework
Espen Hagen, Steinn H. Magnusson, Torbjørn V. Ness, Geir Halnes, Pooja N. Babu, Charl Linssen, Abigail Morrison, Gaute T. Einevoll
Published in Physical Review Research, 2022 February 28
Covariance-based information processing in reservoir computing systems
Sofía Lawrie, Rubén Moreno-Bote, Matthieu Gilson
Pre-print from 2021, April 30
Jennifer S. Goldman, Lionel Kusch, Bahar Hazal Yalcinkaya, Damien Depannemaecker, Trang-Anh E. Nghiem, Viktor Jirsa, Alain Destexhe
Pre-print from 2020, December 28